PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT20821
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family G2-like
Protein Properties Length: 316aa    MW: 34373.8 Da    PI: 6.5046
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT20821genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like104.66e-333993155
   G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
              kprlrWt +LHerFv+av+qLGG+ kAtPk+i+++m+vkgLtl h+kSHLQkYRl
  OIT20821 39 KPRLRWTADLHERFVDAVTQLGGPSKATPKAIMRTMGVKGLTLFHLKSHLQKYRL 93
              79****************************************************8 PP
2Myb_DNA-binding70.42.9e-224192148
                     TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48
                     r+rWT++++e++vdav+qlGg+   t+k+I+rtmg kg+tl ++ks++qky+
         OIT20821 41 RLRWTADLHERFVDAVTQLGGPskaTPKAIMRTMGvKGLTLFHLKSHLQKYR 92
                     89*************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MFPRLIQPPG EDEYNMNIGI HHTHNINGDP CLVLTSDPKP RLRWTADLHE RFVDAVTQLG  60
GPSKATPKAI MRTMGVKGLT LFHLKSHLQK YRLGKLSQKD LGEASKDGLT ATYSLESPCS  120
GGTPQQLPAS DLNEGYEVKE ALRAQMEVQS KLHLQVEAEK HLQIRQDAEQ RYISMLEKAC  180
KMLADQFIGG VVTENDQETC QVLGTRTQVS PLCNPLGLCP SESANLVGVH GPEEVSPRIH  240
PQFTDCSTES CLTSHESPAG LPLEGTSTGG KKRGPNGDST HASVVWGEAD MISSGVRLLQ  300
VNRFGITSSN VQNVSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13640.14e-69G2-like family protein