PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT20712
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family WRKY
Protein Properties Length: 423aa    MW: 48805.4 Da    PI: 9.9822
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT20712genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY83.71.8e-261368359
              -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY  3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
              DgynWrKYGqK+ k s++prsYY+Ct+++Cp+kkkvers  d+++++it +g Hnhe
  OIT20712 13 DGYNWRKYGQKKDKVSQCPRSYYKCTHTKCPAKKKVERSI-DGHITQITHNGWHNHE 68
              9***************************************.***************7 PP
2WRKY83.42.2e-26182239159
               ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
               ++DgynWrKYGqK+vkg+++ r YYrCt+++C+++k+v r+++dpk+++ tY+geHnh+
  OIT20712 182 VNDGYNWRKYGQKVVKGNQHLRDYYRCTYPKCKAHKQVMRASTDPKAIK-TYKGEHNHD 239
               58********************************************987.7*******7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 423 aa     Download sequence    
MTSFGALDKP ACDGYNWRKY GQKKDKVSQC PRSYYKCTHT KCPAKKKVER SIDGHITQIT  60
HNGWHNHELP QPSKQRKDGS ALNGTDCSEV RPDIRTHDRT VVNSSDVSSP SRPDQISTQL  120
ASLLLVKRKR DETINNWIEV DEGHDEPDVK RKKKAVKTLA SSHGTVAGQK IVLPTRSEVV  180
VVNDGYNWRK YGQKVVKGNQ HLRDYYRCTY PKCKAHKQVM RASTDPKAIK TYKGEHNHDT  240
PTYKTCQRYL ALRKGCGDIA DKILRFLGKP SNNKINHFAD IHTKPFVEAA RIYQWPDKVA  300
TQAAGSELKV RETFLRSCMI GYFNDPFSYD PKSEVLHKWF TNRWQVCSVL KITPISHNRF  360
LFQFPLREEA ERINVSEWHW NERRLSLEWW TPVAGTDLAS KRSETQMDQS IRHPASCLVT  420
GYF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1127154KRKRDETINNWIEVDEGHDEPDVKRKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03340.11e-66WRKY family protein