PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT20606 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | MYB_related | ||||||||
Protein Properties | Length: 464aa MW: 52477.1 Da PI: 9.6518 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 36.9 | 8.4e-12 | 61 | 105 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rWT++E+ ++ + ++lG g+W+ Ia+++ Rt q+ s+ qky OIT20606 61 RWTEDEHRAFLIGLEKLGRGNWAGIAKEFVPSRTHTQVASHAQKY 105 9*****************************9*************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 464 aa Download sequence |
MRMAKEIHSE RRGEISRTKK VGSSSNSIKL FGFVITTNSG SSSSRSNMGR RNNNNSNKGT 60 RWTEDEHRAF LIGLEKLGRG NWAGIAKEFV PSRTHTQVAS HAQKYFERLE AEKDNKRAVI 120 KRQKSSVFDI NLAEESCRSS SPTNQPVSEE ASSSKRVVVP VTKDKGKEYL NQETPISPMP 180 VSYRVPGFPP IPMAYNKNMT ISSNDQGPHV YTASWVPNIQ FNGNYAYFPM SYYQFANNSA 240 HNFASSSTNA TPDQRVSSQS DRGACGTFAV TAAVSAKLAV QNRKEYQYEG DATDLSKMEL 300 LDCIPFDHKK LLRFQKIYNY IRDNGLHTEA NYPFEPPFTG DCRCWTLHGT PKIGIVGWRW 360 IAKRDVINVL RDHPVTAAMY FYETFKEHGA VMDIYRPNPG EEPAKDGRHA VLVIGYGKRD 420 GVPYFIIRNN WSLVWGLNGY ALVDPDLLFD FAYPERVRVH PVLN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61620.1 | 4e-23 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT20606 |