PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT20575
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 229aa    MW: 26349.3 Da    PI: 5.6724
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT20575genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.11.2e-19101151255
       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
               +y GVr ++ +g+++AeIrd + ng   r++lg+f+taeeAa a+++a+++++g
  OIT20575 101 HYIGVRKRP-WGKYAAEIRDSTRNG--IRVWLGTFDTAEEAALAYDQAALSMRG 151
               799******.**********44465..*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MSSNSSPLEI DTSFSHSNFF FFQDQSPILQ WDDDLFFNNP LFDDDQSPIP YNSEKDENHQ  60
IFEESSDNTI ISKGSTSHGQ ELEEVTSQEE KEKEKEKEKK HYIGVRKRPW GKYAAEIRDS  120
TRNGIRVWLG TFDTAEEAAL AYDQAALSMR GPWSLLNFPL EKVKKSLEKI EYSCKDGLSP  180
AAVLKATHKT RRVKHKRSSR KKKNKENHNV LVFEDLGAEL LEELLMSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.15e-30ERF family protein