PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT20318
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 343aa    MW: 38334.3 Da    PI: 4.2567
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT20318genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2621.3e-19109158154
       AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54 
               s+ykGVr++k +g+W+AeIrd +     + +r++lg++ taeeA +a++  r+++e
  OIT20318 109 SKYKGVRQRK-WGKWAAEIRDpF-----KgRRVWLGTYSTAEEASRAYELKRLEFE 158
               89*******9.**********55.....45**********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    
MFEPERQLSS DLENLKRNMK NKADTDRTMR KIRIVCYDPD ATDFSDDEEI NYPKSKRFVR  60
EIKLQIGNSF TPPKASETEC SFQDSNNGEK KTKNKALAKP LIQPRQGLSK YKGVRQRKWG  120
KWAAEIRDPF KGRRVWLGTY STAEEASRAY ELKRLEFESM TKNSTNVSEK SSDDQNQTNT  180
NVASVSEDSA ESSASHASHS LPSSVLELES LTSASASAPI PGHNGNEKAS DVPLEANVVE  240
QEVSELALME ETLSLAQIGE TMDLDLELES FLVGADDFSQ HLDEFVIDDF EDPPVCVIEG  300
DEQLPTGLPD FDFDFDFDGY DESFGLMDDA PRMNGTPLNV ACP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.12e-26ERF family protein