PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT20232
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 287aa    MW: 32810.6 Da    PI: 6.6347
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT20232genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.68.9e-202978255
       AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
               y+GVr++  +g+WvAeIr+p++   r+r +lg+f taeeAa a+++a+++l+g
  OIT20232 29 EYRGVRQRT-WGKWVAEIREPKK---RTRLWLGSFATAEEAAMAYDEAARRLYG 78
              69****999.**********965...5*************************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MDNYKRNPLK PWKKGPARGK GGPQNALCEY RGVRQRTWGK WVAEIREPKK RTRLWLGSFA  60
TAEEAAMAYD EAARRLYGPD AYLNLPHMRA NFNPLNKSQK FKWFSSTNFV SSFPNCTTGL  120
LNLSAQPNVH VIHQRLQELK KMEASSSSSS ISDPKNEIYN FTKQPHLTIP QTKEKEVEFS  180
SQNKSVVQEK PQIDLNEFLQ QLGILKRDDD KEDKSHDHSI SCFTESEVSL KDDSSVANFF  240
ADASYNWDTL GAITGIDDHD QAEETSSFID AYNVNDELMF PSSIWNF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57600.11e-68ERF family protein