PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT20231

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

MYB_related

Protein Properties

Length: 821aa MW: 90146.3 Da PI: 6.3686

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT20231	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	21.6	5e-07	762	812	2	46
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT....TTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg....kgRtlkqcksrwqk 46 WT+ E+e l+++v+++ +Wk+I + kgRt ++k++w++ OIT20231 762 VQWTKIEEETLKEGVERFSHFpdRWKKILEFGCdvflKGRTTGDLKDKWRN 812 68*************9844889*9888***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 821 aa Download sequence
MVSEALQQTF MATKHSCTST LPWIWVIEAL ASFNEIDTSL LINLVKKSPE ISDDLGRNAR 60 EMVSLRVLES LFVQRIPNAN NVASVPGANI ELDPSNSCED VLRRILLEAS ASDLKTAAPE 120 MLKWDVRSFI MKKRSLLPKC LLKQLKDSIV DSTSPLSGSL KERSRLEFGN NSRSVPVDAV 180 DSDGFKQGHE VGGTNTQHVA PTRNSDAFTP ADKNTTTYPV YSHSVGSEKG NVYADLNPTL 240 SRTRAEKNGK QISQLGSALV RAKRSIDAST AHEVEVNETG AISENSSDPC AKAAKKFKQF 300 VFSPIRNTVP DLLLSGRDAF PAESSGGSQP IVQNGDSKDE AQVGAFEANG GLSNGCAEHA 360 ASRSGLHGSD SNHNELLPQR MSTDKKFQNI GRSSNGCAEL GTSSGSCQLV MQQESRTHGS 420 KHDLEFNLPQ DLQHGEPSKV AKENIEQSHE FEFSSDTDEY HDESTALATQ KNDFLSSQYA 480 QGEDSLADAD CSELNLCVKC NVGGKLFVCN SDTCPLMVHE SCLGSVPNFD YKGNFYCPFC 540 AYSRAISEYL DSKKKVSLAR KHLAAFIGLG AGQQSKKSLA KSQGTKPHQS REDKNEQLCH 600 NENGRSSLNE ITEAGSAPVD RNSVGVQIMQ TGSPQLEASV PEQCLVAGQQ PEGSELRGDR 660 SKQNQSRVEE ELCHIGNGNK NSLKKAEEAG SGPVNRNSMN AELMQMHPSQ PPVSHEPVCQ 720 GSSSIEENSE EDEIGSRYRV QFRNPEKNHT FPITPQLRRK KVQWTKIEEE TLKEGVERFS 780 HFPDRWKKIL EFGCDVFLKG RTTGDLKDKW RNMSRARERA T

Sequence ? help Back to Top

Protein Sequence Length: 821 aa Download sequence

MVSEALQQTF MATKHSCTST LPWIWVIEAL ASFNEIDTSL LINLVKKSPE ISDDLGRNAR  60
EMVSLRVLES LFVQRIPNAN NVASVPGANI ELDPSNSCED VLRRILLEAS ASDLKTAAPE  120
MLKWDVRSFI MKKRSLLPKC LLKQLKDSIV DSTSPLSGSL KERSRLEFGN NSRSVPVDAV  180
DSDGFKQGHE VGGTNTQHVA PTRNSDAFTP ADKNTTTYPV YSHSVGSEKG NVYADLNPTL  240
SRTRAEKNGK QISQLGSALV RAKRSIDAST AHEVEVNETG AISENSSDPC AKAAKKFKQF  300
VFSPIRNTVP DLLLSGRDAF PAESSGGSQP IVQNGDSKDE AQVGAFEANG GLSNGCAEHA  360
ASRSGLHGSD SNHNELLPQR MSTDKKFQNI GRSSNGCAEL GTSSGSCQLV MQQESRTHGS  420
KHDLEFNLPQ DLQHGEPSKV AKENIEQSHE FEFSSDTDEY HDESTALATQ KNDFLSSQYA  480
QGEDSLADAD CSELNLCVKC NVGGKLFVCN SDTCPLMVHE SCLGSVPNFD YKGNFYCPFC  540
AYSRAISEYL DSKKKVSLAR KHLAAFIGLG AGQQSKKSLA KSQGTKPHQS REDKNEQLCH  600
NENGRSSLNE ITEAGSAPVD RNSVGVQIMQ TGSPQLEASV PEQCLVAGQQ PEGSELRGDR  660
SKQNQSRVEE ELCHIGNGNK NSLKKAEEAG SGPVNRNSMN AELMQMHPSQ PPVSHEPVCQ  720
GSSSIEENSE EDEIGSRYRV QFRNPEKNHT FPITPQLRRK KVQWTKIEEE TLKEGVERFS  780
HFPDRWKKIL EFGCDVFLKG RTTGDLKDKW RNMSRARERA T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G49950.1	1e-07	MYB_related family protein

Link Out ? help Back to Top
Ensembl	OIT20231