PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT20179 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 192aa MW: 21577.2 Da PI: 9.8318 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.1 | 9.2e-18 | 115 | 165 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp+ r++lg++ t +Aaka++ a+ k++g OIT20179 115 HYRGVRRRP-WGKYAAEIRDPTRK--GSRVWLGTYETDVDAAKAYDCAAFKMRG 165 8********.**********8542..4**********99*************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 192 aa Download sequence |
MTRTEDEELT LELISQHLLG ESFVNSLSLD HDICFSTLPD GFQPVILTSD QKPNHFNFDL 60 IFETKPNITR SPTSVTTSVV SNTRIFDDSS LNRTDKKVDG SGYGSSVVEN GKKKHYRGVR 120 RRPWGKYAAE IRDPTRKGSR VWLGTYETDV DAAKAYDCAA FKMRGRKAIL NFPFDAGNLS 180 TPANIGRKRR KG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 186 | 192 | GRKRRKG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G07580.1 | 2e-43 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT20179 |