PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT20096

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

HSF

Protein Properties

Length: 362aa MW: 41982.2 Da PI: 5.2236

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT20096	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	104.6	8.5e-33	67	159	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Flkk++e+++d++++++isws+++ sfvv+d+++f+ ++Lpk+Fkh+nf+SF+RQLn+Y F+k+++++ weF+++ F+kgkk+ll ++k OIT20096 67 FLKKTFEMVDDPNTDSIISWSNTKISFVVWDPHKFSIDLLPKHFKHNNFSSFIRQLNTYRFRKIDSDR---------WEFANEGFQKGKKHLLVNMK 154 9******************999*************************************999.........**************** PP XXXXX CS HSF_DNA-bind 99 rkkse 103 r+k++ OIT20096 155 RRKQQ 159 987 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MEQEKMVTDD VINGGLLTVK EEPILFLDEE EDDIIGTVNT NNGVDEFSSS LLPMPLEGLR 60 DMVPPPFLKK TFEMVDDPNT DSIISWSNTK ISFVVWDPHK FSIDLLPKHF KHNNFSSFIR 120 QLNTYRFRKI DSDRWEFANE GFQKGKKHLL VNMKRRKQQH THQSLHQGGG SAQSWLGSCN 180 KDGFEAELEK LTKDQNTLKM EVQSLKQQQE STESYLATVK ERLQNSETRQ KYMVIFMAKA 240 FKNPLFVQHL IEKIKQRKIL DNGTVAKKRR LANTQCDNKC DGHSLQVQEE FTTIKSEIQT 300 LFSSDESNSS ADEQKRNSQD MSSENYILWE KLMEDDMIYE NGAENDKHHC DIFLELEDLI 360 AS

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MEQEKMVTDD VINGGLLTVK EEPILFLDEE EDDIIGTVNT NNGVDEFSSS LLPMPLEGLR  60
DMVPPPFLKK TFEMVDDPNT DSIISWSNTK ISFVVWDPHK FSIDLLPKHF KHNNFSSFIR  120
QLNTYRFRKI DSDRWEFANE GFQKGKKHLL VNMKRRKQQH THQSLHQGGG SAQSWLGSCN  180
KDGFEAELEK LTKDQNTLKM EVQSLKQQQE STESYLATVK ERLQNSETRQ KYMVIFMAKA  240
FKNPLFVQHL IEKIKQRKIL DNGTVAKKRR LANTQCDNKC DGHSLQVQEE FTTIKSEIQT  300
LFSSDESNSS ADEQKRNSQD MSSENYILWE KLMEDDMIYE NGAENDKHHC DIFLELEDLI  360
AS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	5e-83	HSF family protein

Link Out ? help Back to Top
Ensembl	OIT20096