PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT20054
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family HB-other
Protein Properties Length: 64aa    MW: 7743.74 Da    PI: 4.8619
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT20054genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox27.45.9e-09341543
              SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHH CS
  Homeobox  5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterq 43
              ++f++eq++ Le+ Fe ++++ +e++ +LA +lgL+  q
  OIT20054  3 RKFSEEQVNLLEQSFEDEHKLETERKDKLAFELGLDPHQ 41
              69*********************************9866 PP
Sequence ? help Back to Top
Protein Sequence    Length: 64 aa     Download sequence    
MKRKFSEEQV NLLEQSFEDE HKLETERKDK LAFELGLDPH QEYSKLKTEY DTAIVQKCHL  60
EYII
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36740.17e-21HD-ZIP family protein