PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT19929
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 355aa    MW: 38902.1 Da    PI: 4.8968
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT19929genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.63.6e-19142192155
       AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
               ++++GVr+++ +g+W+AeIrdp     r  r +lg+++taeeAa  +++a+ +l+g
  OIT19929 142 KKFRGVRQRP-WGKWAAEIRDPL----RrVRLWLGTYDTAEEAAMVYDHAAIQLRG 192
               59********.**********72....45*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    
MDQQTMLSSR VKYTEHRKQT TMIKPSAPAI VTGRRKCPEM NAATGGPRVV RITVTDADAT  60
DSSSDEGEGL YGRHRVKKFV NEVRIEPCMG ETVKSNGNGS VSGVLRNGSS ESAVAPKRRK  120
KNAGATKAEA TAARGLKANN VKKFRGVRQR PWGKWAAEIR DPLRRVRLWL GTYDTAEEAA  180
MVYDHAAIQL RGPDALTNFA IPPPAKTTSC SSGYNSGEES HNDQRSPKSV LRCASTSFEE  240
SQNNEEAEAE SIPSLPSESA QKNSDFRDEN DISNFCEFPP FESLFPDDLF LFENPVPIPD  300
LFEPAALPDN IFGETCSDIF IGSSNDFGFG SSSWPEDDYF QDIGDIFGSD PLVAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.14e-48ERF family protein