PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT19702
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 189aa    MW: 21337 Da    PI: 8.6651
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT19702genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2538.5e-1755105255
       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
               +y GVr ++ +g+++AeIrd + ng   r++lg+f +aeeAa a+++ +++++g
  OIT19702  55 RYIGVRTRP-WGKYAAEIRDSTRNG--IRVWLGTFSSAEEAAMAYDQVALSMRG 105
               799***999.**********44465..*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MDLKIQDEKQ ASNIFVAEKV EIKSTSLEDT SSSETSSKEK ENDFSSKRPQ KTEKRYIGVR  60
TRPWGKYAAE IRDSTRNGIR VWLGTFSSAE EAAMAYDQVA LSMRGPSTCL NFPVERVSKM  120
LQETECNFLR NGLSPAAALK EKHKKRSSTV SIKKGKNKHV NKEDNIVFIF EDLGTDLLDE  180
LLSEYSSSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.11e-40ERF family protein