PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT19664 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 362aa MW: 40132.6 Da PI: 4.8142 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.4 | 2.1e-19 | 92 | 142 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ +g+WvAeIr+p r r +lg+fgta eAa a+++a+++++g OIT19664 92 CNYRGVRQRT-WGKWVAEIREPD----RgSRLWLGTFGTAIEAALAYDEAARAMYG 142 56*****999.**********82....34************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 362 aa Download sequence |
MSSDYSERNK KMAILDQAPK MTSLPLDCSR KRKSRGRKDG TKNVEETLAK WKEYNQKLDC 60 VDAEGKPVRK VPAKGSKKGC MKGKGGPENS RCNYRGVRQR TWGKWVAEIR EPDRGSRLWL 120 GTFGTAIEAA LAYDEAARAM YGASARLNLP NYPSSKESSK DDSSWATTSA SDSTAASSLF 180 EAGELKGISE IKFEDGEGES RINGVTTAIH EASTPWTSEK HEAKSKMGVV EFKESIESID 240 QDMLKSGRDY LDNLNWDEMF DVEELLGMLD SAPAGAPAFM QDFDSIAGQK EQYAYNNNPL 300 SDSSFQQQNA DHKLLGGTQQ MQQQAPIAVN YGFDFLKPGR EEDLNFSLDD LALMDFDSEL 360 GV |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 29 | 34 | SRKRKS |
2 | 32 | 39 | RKSRGRKD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40340.1 | 7e-38 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT19664 |