PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT19664
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 362aa    MW: 40132.6 Da    PI: 4.8142
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT19664genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.42.1e-1992142155
       AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
               + y+GVr++  +g+WvAeIr+p     r  r +lg+fgta eAa a+++a+++++g
  OIT19664  92 CNYRGVRQRT-WGKWVAEIREPD----RgSRLWLGTFGTAIEAALAYDEAARAMYG 142
               56*****999.**********82....34************************998 PP

Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    
MSSDYSERNK KMAILDQAPK MTSLPLDCSR KRKSRGRKDG TKNVEETLAK WKEYNQKLDC  60
VDAEGKPVRK VPAKGSKKGC MKGKGGPENS RCNYRGVRQR TWGKWVAEIR EPDRGSRLWL  120
GTFGTAIEAA LAYDEAARAM YGASARLNLP NYPSSKESSK DDSSWATTSA SDSTAASSLF  180
EAGELKGISE IKFEDGEGES RINGVTTAIH EASTPWTSEK HEAKSKMGVV EFKESIESID  240
QDMLKSGRDY LDNLNWDEMF DVEELLGMLD SAPAGAPAFM QDFDSIAGQK EQYAYNNNPL  300
SDSSFQQQNA DHKLLGGTQQ MQQQAPIAVN YGFDFLKPGR EEDLNFSLDD LALMDFDSEL  360
GV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12934SRKRKS
23239RKSRGRKD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40340.17e-38ERF family protein