PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT19524 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | MYB | ||||||||
Protein Properties | Length: 246aa MW: 28177.9 Da PI: 7.196 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 24.2 | 8e-08 | 24 | 64 | 3 | 41 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqck 41 WT+eE +++ a + + + +W+ +a++++ g+++ ++ OIT19524 24 EWTKEENKKFESALAIYDEKtpnRWSMVAAMIP-GKSALDVM 64 7********************************.***98875 PP | |||||||
2 | Myb_DNA-binding | 40.4 | 6.9e-13 | 121 | 165 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ +++ + +++G+g+W+ I+r + +t+ q+ s+ qky OIT19524 121 PWTEEEHRRFLLGLEKYGKGDWRNISRNFVISKTPTQVASHAQKY 165 8*****************************789***********9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
METLFPAAFL PNSNWMMQQI KSTEWTKEEN KKFESALAIY DEKTPNRWSM VAAMIPGKSA 60 LDVMMQYKEL VADVSDIEAG LVPTPRHFAS SFTLEFIDHR EIHTFSKRGK SCDQERKKGV 120 PWTEEEHRRF LLGLEKYGKG DWRNISRNFV ISKTPTQVAS HAQKYYLRQL PGGKDKKRPS 180 IHDITTVHLT DDELLNNSNN KSMCDETYSK APLQNSTSTG DVLIGCWNDS NDKALMTYGS 240 LYDNLV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38090.1 | 3e-86 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT19524 |