PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT19461
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 223aa    MW: 25173.2 Da    PI: 8.484
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT19461genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP246.96.9e-15103153255
       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
               +y GV +++ +g + Ae rdp  +g  +r +lg++ t+e+Aa a+++a+ k++g
  OIT19461 103 RYIGVKRRP-WGTFSAEMRDPDRRG--ARLWLGTYETPEDAAMAYDQAAFKIRG 153
               699***9*9.**********95454..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MNSADVTFSF SDFNLLESIK QHLLIDSDFS EILSPMSSNN ALPDSPSSCF GSSPSAENSF  60
EISLWDQNFE ETMPNLEKKC ESEEETKGNV AAREKNAPQD WRRYIGVKRR PWGTFSAEMR  120
DPDRRGARLW LGTYETPEDA AMAYDQAAFK IRGSRARLNF PHLIGSNMPK PARVTARRSR  180
TRSPEPSFSS STSSSVNVTR KRKIDVINSI AKVCHGWNLQ MLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.11e-33ERF family protein