PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT19405
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 358aa    MW: 40556.2 Da    PI: 6.9666
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT19405genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.95.1e-18146196256
       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                y+GVr++  +g+WvAeIr p +   r r++lg++ tae Aa a+++a+ kl+ge
  OIT19405 146 LYRGVRQRQ-WGKWVAEIRLPQN---RMRVWLGTYETAEAAAYAYDRAAYKLRGE 196
               59****999.**********954...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    
NMCKIQENMS YNYDEAAQIR SSLSQILLTS STNTLDSIFS HCQQQQTTTV TSQSRTIFSD  60
CQESNNQMAT KNVFEPLGSS VYSNNNYTSV PDNLGSSVYL RQKDLLQKFW EENRANGTNP  120
TTSTQIPHQN TSLHSGNYVC PSKKKLYRGV RQRQWGKWVA EIRLPQNRMR VWLGTYETAE  180
AAAYAYDRAA YKLRGEYARL NFPNIRDDTS MLGFGDSTKM NAVKNSVDAK IQAICQKVKR  240
ERAKKGVKKI VESDKKVEKN VDLESSSCSS SIVCNESWSN SDVISQSTSE DGLWKSENSP  300
CSVLDDPHVG PKNDDPNCYI TSITHQFERP MMELEFEDCS LARMPSFDPE LIWSILAN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64380.11e-59ERF family protein