PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT19267
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 270aa    MW: 30567.2 Da    PI: 5.8595
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT19267genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.41.1e-20130180255
       AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
               +y+GVr+++ +g+++AeIrdp   + k +r++lg+f+ta eAaka+++a+ kl+g
  OIT19267 130 HYRGVRQRP-WGKFAAEIRDP---NrKGTRVWLGTFDTALEAAKAYDRAAFKLRG 180
               8********.**********9...6566*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MASPQENCTT LDLIRKHLLD DVAFMEYYCS EPTTLYSQSS SSSDQSLSSI INASELNNDT  60
FSFEANTTQS SKTEFDSFEF ETKPNLSAAR ISSNSPHQTS FKERKPSLNI AIPMKQVQKV  120
EISNDTEKKH YRGVRQRPWG KFAAEIRDPN RKGTRVWLGT FDTALEAAKA YDRAAFKLRG  180
SKAIVNFPLQ VEQQDNDEIR PLVNSSRKRV RETENEEQLA INKEVKREEE RVPTAPLTPS  240
SWSAIWDCGD GKGIFEVPPL SPLWPILSLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.15e-54ERF family protein