PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT19133
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 365aa    MW: 40147.6 Da    PI: 7.0054
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT19133genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.31.2e-20189238255
       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ kl+g
  OIT19133 189 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAALAYDKAAYKLRG 238
               59******9.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 365 aa     Download sequence    
MAATMDFWTS TLLDLNSSNS FQGGGELMEA LAPFIKSASP INYPPISPSP SPSFSFPSTN  60
SQSFPITTTT TSTSTSYPYD SFSLTSQPNM SYDGCSTSTT INPTFSQGFS GFEMEQSGSI  120
VLDQLTQAHV HQLQAQLYLQ NNHQQQQMMS SAATFQDSLT HQHNHHASFL APKPVSMKQS  180
GSPPRPPKLY RGVRQRHWGK WVAEIRLPKN RTRLWLGTFD TAEEAALAYD KAAYKLRGDF  240
ARLNFPHLRH NGSLIGGEFG EYKPLHSSVD AKLQAICQDL AQGKSIDTKK KRKVASKKQE  300
SKPAEVGSES DGSGPGSGFG SGGSSPISDL TFTEFAEDDS IWDMCSENFM LQKHPSHEID  360
WASLR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1289294KKKRKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.14e-59ERF family protein