PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT19021
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family FAR1
Protein Properties Length: 319aa    MW: 36359.1 Da    PI: 5.0058
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT19021genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1371.1e-11130209191
      FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
               +fY+e+A+   F + k++s+k+   + +   ++ C ++ k+++++          +++r +C+ +++  +e++g w+v+k++++HnH+l p
  OIT19021 130 DFYKEHARLSEFCIFKRTSNKK-GGDIVRYVQYGCDRSRKPRNKH----------VTKRRNCRVRINGILEENGSWHVSKVVKKHNHQLEP 209
               6****************99998.56668999*****998887765..........55999****************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MNSNRETSLE PLNPNNSLET RSEQLRNALH TSLGLNSNDS LMNEDESIDI DSDDNFNDGE  60
NHVDDGAAAA ADDDDDAAAD DDDDDDNGHY FEEEEEVGED REMPNDFNEE DLVICPITGM  120
QFSSKDVMFD FYKEHARLSE FCIFKRTSNK KGGDIVRYVQ YGCDRSRKPR NKHVTKRRNC  180
RVRINGILEE NGSWHVSKVV KKHNHQLEPA LSRLMAGHRS LSKSLKRTLA AKDIAGLRPS  240
KNIRVAEVLA GGPENLVCTP KDCRNYILKS RKLQLQEGDA QSLLKFFSDM QQKDREFYYS  300
VDVDSFGRLR NVVWVHSHS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G15090.13e-19FAR1 family protein