PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT18940 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | B3 | ||||||||
Protein Properties | Length: 110aa MW: 12785.9 Da PI: 8.4406 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 45.9 | 9.9e-15 | 18 | 96 | 5 | 90 |
-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 +p+ + k++ l +pk+ + g+ ++ s++ +l+ +g++W v+l + +++r l +GWk+Fv +n+Lk g +++F+l++ +++ OIT18940 18 KVPKPYIKRDFLFIPKSIC---GYLPPISVKTMLRY-NGKEWAVTL--TSGGRR-RLVNGWKQFVVDNNLKKGNVLLFELVEATSE 96 46788999999********...66677887777665.9********..444444.5889********************9987443 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 110 aa Download sequence |
MDANEWIEEE LYPWFWMKVP KPYIKRDFLF IPKSICGYLP PISVKTMLRY NGKEWAVTLT 60 SGGRRRLVNG WKQFVVDNNL KKGNVLLFEL VEATSEAVIF SVEELGLTNA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49480.1 | 2e-07 | B3 family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT18940 |