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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OIT18804 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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| Family | CPP | ||||||||
| Protein Properties | Length: 159aa MW: 17591.3 Da PI: 8.0573 | ||||||||
| Description | CPP family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | TCR | 53.6 | 4.5e-17 | 13 | 52 | 1 | 40 |
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40
k++kgC+Ckks ClkkYCeCf+a+ Cse+CkC dCkN e
OIT18804 13 KHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFE 52
589***********************************65 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 159 aa Download sequence |
MQEEAGDGLV LPKHNKGCHC KKSGCLKKYC ECFQANILCS ENCKCMDCKN FEGSQERQAL 60 FHGDHANNMA YLQQAANAAI TGAIGSSGYG SPPVNKKRKA QELFFGSMIK DPVHRLGQLQ 120 QVNITVVQFN LTCFSIVHVI FIVWHGICSD NNIVELKVI |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT4G29000.1 | 2e-59 | CPP family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | OIT18804 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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