PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT18677
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 422aa    MW: 47390.1 Da    PI: 4.3271
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT18677genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.95.9e-194998255
       AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
              ++ GVr+++ +grWvAeI+d      ++ r++lg+f+taeeAa+a+++a+  l+g
  OIT18677 49 RFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTAEEAARAYDEAACLLRG 98
              789******.7*********33....35**********************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 422 aa     Download sequence    
MARKRRASEG LSENKMHNDD QAGNAAWEEM VKEAATAAAL GGARRARKRF VGVRQRPSGR  60
WVAEIKDTIQ KIRVWLGTFD TAEEAARAYD EAACLLRGAN TRTNFWPSSS SSSSTPALPS  120
KITNLLLNRL KARNNSIAAA AVSSSDSSEP VETRDQDKQL EEYRDETAYF SDSQFMEYLK  180
DPEDQIIDNS MSTNTCAIAM NNFTNTLDAC LTENDYSVVQ PVMKSDEINS IGGEINNNIV  240
EVDAEEEDEI EEENDSSDIG DVEPISFHFV DEIESSCYYS PFEIADEINS TDTMDQQGIF  300
YGDESCISEA MRRMNYERKF SASLYAFNGI TECLKLKLKS GGVVQRERSE QLSRLRNACK  360
RNRKEDEKKI NKEGISTEMG ERKETEYSSQ SSLETGQSET SYESELSLWS SIDLPPICAF  420
FT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.12e-21ERF family protein