PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT08704
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 320aa    MW: 36023.3 Da    PI: 6.1787
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT08704genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.77.1e-19176226255
       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
               +y+GVr+++ +g++++eIrdp+ +g  +r++lg+f ta eAaka+++a+ k++g
  OIT08704 176 HYRGVRQRP-WGKYASEIRDPTRRG--ARVWLGTFNTAVEAAKAYDRAAFKMRG 226
               7********.**********97665..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MECFDEYFAL EKIRNHLLGD FSPKTLKFGA ELTSSRPCSD IMTESSSSQS ESASSDSLPF  60
DFLSDSFDFE ADFFQFGKEV SNSSAESANS VHNSTNFIKL ESEPTLSSSE YEKSQVIIDL  120
TSPKLSNVSD RKPSLKIDLP PVKKFEWIGF GNSTTQSNSI VSVTMQQNRK TEEKRHYRGV  180
RQRPWGKYAS EIRDPTRRGA RVWLGTFNTA VEAAKAYDRA AFKMRGSKAI LNFPLEVGKN  240
LSYSSSAMDG SVKRRRESEE CGDEKEVKKV EKCKEEESWP LTPSSWNFLW EQNTNGMLNL  300
PPLSPLSPHP SLGCSQLIQI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1253272KRRRESEECGDEKEVKKVEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47230.17e-45ERF family protein