PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT08450

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

MYB_related

Protein Properties

Length: 735aa MW: 83706.5 Da PI: 8.0606

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT08450	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.8	2.1e-07	555	601	2	47
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmgkgRtlkqcksrwqky 47 ++WT+eE+e+++d v+ + Wk + ++ +t+++++s+++++ OIT08450 555 LSWTAEEEERFKDMVRSSAMSnnKWKNSKKLLP-SKTRNMLVSYYFNV 601 68***********986655559999999.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 735 aa Download sequence
MEAWSSLNDE SQVHKGNGES GSGINLTVEL NGIDGCSKNR LKSLFDQVLS VFLSEVTEKK 60 CLRPLPVMTS SGQPLDLFKL YWIVRKIGGY DRVSSKNLWA FIAEHCGLDV GAVAFVKLVY 120 VKYLAEFDHW LRQFCKDGNL EKGEGGVIRR LDLLSKELET RFRRLLLRRC QKKKDTNLLP 180 SKNGQVDFEM FTAESVNKTN DHTTRRSYSA ENRNGNLYNS DEISVSKMDD DYVFLVSAEG 240 IVEKVLYKAP DKSNNEYDDD ENFFAHDGKN KVTSNGEVIQ RAASAKSVIE NVFDSRKRKR 300 ESSCFSGMLN WINHAAKHSN DPEIGEVPES SKWKGHTSNE FWFQVLLVKE ALLKRRHIDT 360 NAEESNPQKK QRMHPSMYED ERLNNQPAEK LRCSKRIPVS PKHAPCPCCN SCSTLHNKAA 420 THQKEEEEDI RPDLTSVEVS VTEKIDDSGD QQTHPEVSVG PLHQAEVPEW SGVISESDSK 480 WLGTRMWPPE VETTKSLVEL DPIGEGRRSS CGCRFPQSVE CIRFHIAEKR FKLKLELGPL 540 FNRWRFDRMG EEVSLSWTAE EEERFKDMVR SSAMSNNKWK NSKKLLPSKT RNMLVSYYFN 600 VFLIRRRSYQ NRVTPKELDS DDDEIELGSV GDSFGNIAVH VPSSRSLTCV ENKASLSSFF 660 TSSPATFNPR PVSQLMSPTS SITEINQQFV APEDTLKSNF GESPMKKKKR IKFSIPLAPV 720 NKFSTKNLQI NYKSV

Sequence ? help Back to Top

Protein Sequence Length: 735 aa Download sequence

MEAWSSLNDE SQVHKGNGES GSGINLTVEL NGIDGCSKNR LKSLFDQVLS VFLSEVTEKK  60
CLRPLPVMTS SGQPLDLFKL YWIVRKIGGY DRVSSKNLWA FIAEHCGLDV GAVAFVKLVY  120
VKYLAEFDHW LRQFCKDGNL EKGEGGVIRR LDLLSKELET RFRRLLLRRC QKKKDTNLLP  180
SKNGQVDFEM FTAESVNKTN DHTTRRSYSA ENRNGNLYNS DEISVSKMDD DYVFLVSAEG  240
IVEKVLYKAP DKSNNEYDDD ENFFAHDGKN KVTSNGEVIQ RAASAKSVIE NVFDSRKRKR  300
ESSCFSGMLN WINHAAKHSN DPEIGEVPES SKWKGHTSNE FWFQVLLVKE ALLKRRHIDT  360
NAEESNPQKK QRMHPSMYED ERLNNQPAEK LRCSKRIPVS PKHAPCPCCN SCSTLHNKAA  420
THQKEEEEDI RPDLTSVEVS VTEKIDDSGD QQTHPEVSVG PLHQAEVPEW SGVISESDSK  480
WLGTRMWPPE VETTKSLVEL DPIGEGRRSS CGCRFPQSVE CIRFHIAEKR FKLKLELGPL  540
FNRWRFDRMG EEVSLSWTAE EEERFKDMVR SSAMSNNKWK NSKKLLPSKT RNMLVSYYFN  600
VFLIRRRSYQ NRVTPKELDS DDDEIELGSV GDSFGNIAVH VPSSRSLTCV ENKASLSSFF  660
TSSPATFNPR PVSQLMSPTS SITEINQQFV APEDTLKSNF GESPMKKKKR IKFSIPLAPV  720
NKFSTKNLQI NYKSV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	163	174	RRLLLRRCQKKK

Link Out ? help Back to Top
Ensembl	OIT08450