PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT08397
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family G2-like
Protein Properties Length: 459aa    MW: 50453.1 Da    PI: 4.7095
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT08397genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like108.24.5e-34248302155
   G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
               k+r+rWtpeLHe+Fveav++LGGse+AtPk +l+lmkv+gLt++hvkSHLQkYR+
  OIT08397 248 KQRMRWTPELHEAFVEAVNKLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRT 302
               79****************************************************8 PP
2Myb_DNA-binding56.37.4e-18250301148
                      TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r+rWT+e++e +v+av++lGg    t+k + + m  +g+t +++ks++qky+
         OIT08397 250 RMRWTPELHEAFVEAVNKLGGSeraTPKGVLKLMKvEGLTIYHVKSHLQKYR 301
                      89******************99*****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 459 aa     Download sequence    
MEARPAVSVQ SVVASQLSNC GASGALSSSF PMLPTVLGEK YPLLPDLQQA STEKEFKQHP  60
GTFVSHLPSN SGAVGLMFSS SSGFSADLHF SSVPPQENHS GPAPFISQST NSETSILLPH  120
SGVLQSTASS QYLNENNEPW CIDPLPDFLD YSMNTPVQNS QLACSNKQSD WQEWADLVIN  180
EEDALTSNWN EIMADTSLAE TEMQHQEEKQ PSNFPMQQVQ TSQQIPAVAV ENSAIAPASS  240
PASGAATKQR MRWTPELHEA FVEAVNKLGG SERATPKGVL KLMKVEGLTI YHVKSHLQKY  300
RTARYKPEAS EESSEKKHSS IDDLSSLDLK TGIEITEALR LQMEVQKRLH EQLEIQRNLQ  360
LRIEEQGRYL QEMFEKQCKS IPGVDLAKGS SSTADDAFAQ LSDAVQSSSC KNDPGVSQVD  420
IAKEVDEKQK KREKEVGEPE TNITSTFDSP PSKRSKLDE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28610.16e-82G2-like family protein