PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT08032 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | WRKY | ||||||||
Protein Properties | Length: 224aa MW: 25267.3 Da PI: 6.9343 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 96.9 | 1.4e-30 | 53 | 111 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YY+C+s+ gC++kk+vers++d ++++itY+++Hnh+ OIT08032 53 SDCWSWRKYGQKPIKGSPYPRGYYKCSSSkGCSAKKQVERSSTDSSLFIITYTSTHNHP 111 699************************998****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence |
MGKSRPSKSD SKTSRLLEQQ LVATKKRKVA QKVVITVQME ANDIKQKNEG APSDCWSWRK 60 YGQKPIKGSP YPRGYYKCSS SKGCSAKKQV ERSSTDSSLF IITYTSTHNH PGPNFPNKDS 120 PLNPVTQDSS MTLQQPITDR HVSLEVNDSI SLVQQEENQF THKFLGTISY DDFLPLSYPQ 180 LMNFPKSELS EENDFYDELG ELQLPPSFTS FAGIFEETIL VDPS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G34830.1 | 3e-23 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT08032 |