PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT07985 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 238aa MW: 27026.8 Da PI: 6.6397 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 45.9 | 1.4e-14 | 112 | 165 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++y GV +++ +g + Ae rdps g +r +lg++ tae+Aa a+++a+ k++g OIT07985 112 TRYIGVKRRP-WGTFSAETRDPSRKG-EgARLWLGTYETAEDAALAYDQAAFKIRG 165 589****9*9.**********85533.35*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence |
MEMNPADETL FFSESHHLLE SIKQHLLDDS DFSEIFSPMS SSNEILPNSP SSSFSSFDFD 60 CSFLNWDENF EETLIPTDQN PSHESHEKYS ESEEKTQAPA VARERNAPRD WTRYIGVKRR 120 PWGTFSAETR DPSRKGEGAR LWLGTYETAE DAALAYDQAA FKIRGSRARL NFPHLIGSNM 180 PKPARVTARR SRTRSPEPSS SSSTSSSENI PRKRNIDVIN SIAKAKFLRH SLNLQRLA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44840.1 | 2e-21 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT07985 |