PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT07744 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 276aa MW: 30570.5 Da PI: 6.9553 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.2 | 8.5e-18 | 99 | 148 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++GVr + +g+Wv+eIr p++ + r++lg++ tae+Aa+a++ a+++++g OIT07744 99 TFRGVRKRN-WGKWVSEIRQPRK---KSRIWLGTYPTAEMAARAHDVAALAIKG 148 59****887.**********843...6***********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 276 aa Download sequence |
MENHYLQQDF SISSCSSSIT SSSFASSSNG LNSPSTTTSS TSSSSFHETI NAKTSSNGYT 60 CKSKKSSKIV QDFTKNGNGH GNEKNKKTRK NQGDEKHPTF RGVRKRNWGK WVSEIRQPRK 120 KSRIWLGTYP TAEMAARAHD VAALAIKGNS AYLNFPHLAD QLPRPASTSP KDIQAAAAKA 180 AGSTFLEENP IRDEAESSQI ELHSSHSSTN LASENTQELL NSPSMDNDDT FFDLPDLTID 240 QVDQNDRYQY PISTWQLAGA DSGIFRLEEP FLWECY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44940.1 | 2e-58 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT07744 |