PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OIT07717 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 143aa MW: 16600 Da PI: 10.2926 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.5 | 2.4e-16 | 14 | 60 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W+++Ed +l v+++G ++W+ +++ g+ R++k+c+ rw + OIT07717 14 KGAWSEDEDNKLRAFVEKHGHPNWRQLPKYAGLMRCGKSCRQRWMNN 60 79******************************************997 PP | |||||||
2 | Myb_DNA-binding | 48.8 | 1.6e-15 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+ + eE+el+++++++lG++ W++Ia+++ gR+++++k+ w+ + OIT07717 67 KGNYSLEEEELIIKLHNELGNR-WSAIAEKLL-GRSDNDIKNQWHAH 111 7899******************.********9.***********976 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 143 aa Download sequence |
MVRTPSVDKN GMKKGAWSED EDNKLRAFVE KHGHPNWRQL PKYAGLMRCG KSCRQRWMNN 60 LRPGLKKGNY SLEEEELIIK LHNELGNRWS AIAEKLLGRS DNDIKNQWHA HLKKCANVNT 120 NSSTSTEFDN LLIKFHNMKL TVI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G16490.1 | 4e-51 | MYB family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OIT07717 |