PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT07400 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | B3 | ||||||||
Protein Properties | Length: 90aa MW: 10243.2 Da PI: 9.6603 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 36.7 | 7.4e-12 | 15 | 80 | 18 | 90 |
--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 18 lpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 lpk+ + g+ ++ s++++l+ +g++W v+l ++ + l +GWk+Fv +n+Lk g +++F+l++ +++ OIT07400 15 LPKNIC---GYLPPISVKIILRC-NGKEWAVTL---TSGVWRRLVNGWKQFVVDNNLKKGSVLLFELVQVTSG 80 455555...66678899999877.9********...3444556999*********************998776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 90 aa Download sequence |
MNPEPYLYIM FLQFLPKNIC GYLPPISVKI ILRCNGKEWA VTLTSGVWRR LVNGWKQFVV 60 DNNLKKGSVL LFELVQVTSG VVIFSIEVLG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49480.1 | 2e-06 | B3 family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT07400 |