PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT07204
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family G2-like
Protein Properties Length: 398aa    MW: 44108.1 Da    PI: 8.8709
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT07204genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like104.94.7e-33257312156
   G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
               k+r++W+peLH+rFv+a++qLGGs++AtPk+i+elm+v+gLt+++vkSHLQkYRl+
  OIT07204 257 KQRRCWSPELHRRFVDALQQLGGSQVATPKQIRELMQVDGLTNDEVKSHLQKYRLH 312
               79****************************************************97 PP
2Myb_DNA-binding46.86.9e-15259310148
                      TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r  W++e++ ++vda +qlGg    t+k I + m+  g+t  ++ks++qky+
         OIT07204 259 RRCWSPELHRRFVDALQQLGGSqvaTPKQIRELMQvDGLTNDEVKSHLQKYR 310
                      568*****************99*****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 398 aa     Download sequence    
MGSIPPELSL DCRPTFIPTS ITDFLKQLSS IRNVPDKLAQ IDDYISRLED EMRKIDAFKR  60
ELPLSVLLVK DAIVALRAES VQCRKSRTEP VLEEFIPLKK SSNEDNKAEV TKDKDSSREK  120
MSWMSSVQLW NSDQNTDEAN NKQRSKSELK IRSPEEGNSS VSEDRFQSCK TLNIGKAFSP  180
FKGYSGFSVT TVGKDDKDEL PGVPGLSLHT PGIIKLREDA SGSNSKHNGS RGGISSVASS  240
QTNIRNGSLS QQQAARKQRR CWSPELHRRF VDALQQLGGS QVATPKQIRE LMQVDGLTND  300
EVKSHLQKYR LHTRRIPNTQ TQQANQSGVA LWMSQDQYGG SSKQSSSQSG SPQGPLHLSG  360
SSRGTSTTVG DSMEEEDDVK SESQSWKNHA HMSGKIDV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03500.13e-55G2-like family protein