PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT07179
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 376aa    MW: 43861.2 Da    PI: 4.8493
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT07179genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B356.16.8e-181197195
              EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
        B3  1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95
              ffk + p++  +s+ l +p  f+ e+ +gk   +k ++l+d+ g++W + l   kk++  ++++GW +F ++n L+ gDf++F +dg+  f   +k
  OIT07179 11 FFKFFYPEN--SSQKLKIPTAFT-EYkNGK--LPKRVSLRDRFGNVWPIGL--AKKDRDLYFQDGWVKFIEDNSLEFGDFLIFDYDGNGVF--DFK 97
              677775544..44559******9.563555..8889***************..*********************************98777..444 PP
2B334.82.9e-112793581091
               HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE. CS
        B3  10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefe 91 
               + ++++l++p + +++++++   +  + ++d++gr++e +++++k + r++l+kGW++ ++ n ++  D+++ ++++  s++ 
  OIT07179 279 AKRRDQLYVPVDVVRDYNLE--LPPRMFFRDSEGRKFETEVNIWKDG-RIWLKKGWRKICRWNLVEKEDSCICEFMRGkSNEV 358
               567899***********666..5567***************999985.89**********************99987645554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 376 aa     Download sequence    
MDDAKKMEKG FFKFFYPENS SQKLKIPTAF TEYKNGKLPK RVSLRDRFGN VWPIGLAKKD  60
RDLYFQDGWV KFIEDNSLEF GDFLIFDYDG NGVFDFKLLG KTACEKKGAG VTSVKVEEEE  120
MINIAHQKIE EPKGKKQLAS NSISSTSSSD GDEDEEYMVE EEDEDYEEEE TNEKAIVICK  180
KKPPRSKGTY VEEEKDDDNE GEEEEEHEED EEQTEEEEEE EKNEKARMFK KKAPCSKAVF  240
KRATTIKKRD VPDQYGAEIF RSGRATQPKN PYFVAKIRAK RRDQLYVPVD VVRDYNLELP  300
PRMFFRDSEG RKFETEVNIW KDGRIWLKKG WRKICRWNLV EKEDSCICEF MRGKSNEVLY  360
LQVTVVKAGG VSNPSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.11e-19B3 family protein