PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT07178
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 664aa    MW: 75878.6 Da    PI: 9.2024
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT07178genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B340.26.2e-1346133598
               -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
        B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                + ++v   g+l++p +f++ehg +     t++l  ++   W v +  +k++++++l + W+eF + + +    f++Fk+ ++s f  +v++f+
  OIT07178  46 IVEPSVIDDGQLRMPDPFVQEHGDE--LLDTVKLIVPTDDFWCVSV--KKSGKMIWLHDSWREFMEHHSIGRWYFLLFKYGKNSHF--NVHIFD 133
               56789999**************865..667****************..********************************998999..999997 PP
2B366.83.1e-21353445196
               EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEE CS
        B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkv 96 
               f ++l+  +v ++++l +p +f++e++ k  +s  + l+d+ g++W+ ++   +++ + +l++GW +Fv++ngL +gD +vF+l+++ ++ el++kv
  OIT07178 353 FMQILLEYNVVRNRILNIPADFVREYMPK--TSELIELQDSAGNKWKARC--IRRKMHLFLSEGWFKFVRDNGLLVGDACVFELIKDlQTDELMLKV 445
               66778888999***************855..5679***************..999999**************************9988888777665 PP
3B366.73.4e-21561645996
               HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEE CS
        B3   9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkv 96 
               +v ++ +l++p +f+++++ k  +s+ + l+d++g++W+  +   +++ +++l+kGW +Fv++n+L +gD++vF+l+++ +  el++kv
  OIT07178 561 NVVRNYILYIPPEFVQDYMPK--TSVPVELQDPDGNKWNTHC--VRRKTMMFLSKGWVKFVRDNDLLVGDTCVFELINDiRADELMLKV 645
               5778889***********844..7889***************..999999*************************99877766665554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 664 aa     Download sequence    
ITLTLACMVN ALFSANLSTG KSLISANAVR MEPRTYSYSS ASFYVIVEPS VIDDGQLRMP  60
DPFVQEHGDE LLDTVKLIVP TDDFWCVSVK KSGKMIWLHD SWREFMEHHS IGRWYFLLFK  120
YGKNSHFNVH IFDLNATEID YQCKDHGNAK LGAISQSLSY GKEIICCVGD DKEDESSVEI  180
VDPLETEQGP ESSAKSSRAK RCKILPRSKF RHFYDTRSRT NKLHDEGRVL NKKNLNISGG  240
SNLTKPLVGK LVQQNMDTPI YSAVVTGGVT NQDDAQVGSK NDILQLNESK HKIHLDQYIQ  300
IEPTADTRKS FTGQQWEKSV RRGRPHKRGR AKATETNRAI NAAKMFKPEN PYFMQILLEY  360
NVVRNRILNI PADFVREYMP KTSELIELQD SAGNKWKARC IRRKMHLFLS EGWFKFVRDN  420
GLLVGDACVF ELIKDLQTDE LMLKVHIFRS RVEENSTNLH TCSVSEPTLS IGRNCIQFNE  480
SKHTETSDAF GPVSSNRSNC KNDTKTSFTS QQQEKSIGRG RPYNPRKRGR PRAAEANMAI  540
NAAKMLMPAN PYFVTTLGVY NVVRNYILYI PPEFVQDYMP KTSVPVELQD PDGNKWNTHC  600
VRRKTMMFLS KGWVKFVRDN DLLVGDTCVF ELINDIRADE LMLKVHIFRA TRKKTQQIDT  660
LVAI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49480.14e-21B3 family protein