PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT07177
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 277aa    MW: 32172.1 Da    PI: 9.7826
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT07177genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B354.22.7e-1715104199
               EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
        B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
               ffk++  + + ks  l++p +f+++++++  ++ + tl+ +sg  W+vkl      ++ ++ +GW++F k+n++++g+f+vF++d+  +f  +v++f+k
  OIT07177  15 FFKIF--NPTVKSE-LRIPAHFLRHISED--SPDKATLRCLSGGIWNVKL--HIDEDGLLIHQGWEKFHKDNHIEDGEFLVFRYDRALQF--TVRIFNK 104
               77777..5555555.9*******999766..5668***************..999999**************************986777..9999987 PP
2B376.52.9e-24174267199
               EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
        B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
               f+k l++ +v+ks+ +++pk+f+e+ +++ ++++t++l +++g++W+v++    ++g + + +GWk+Fvk+n+LkegD++vF+l++  + el+v+vf++
  OIT07177 174 FVKCLKSYNVNKSCFIYVPKSFCEQLSES-ANKTTVILSNSEGKKWKVNF--VLQKGYHAFCGGWKQFVKDNKLKEGDVCVFQLVN--TNELKVSVFDN 267
               899999999**************999655.4667****************..66666788999********************987..55569*99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MMEKTSFKID RRAIFFKIFN PTVKSELRIP AHFLRHISED SPDKATLRCL SGGIWNVKLH  60
IDEDGLLIHQ GWEKFHKDNH IEDGEFLVFR YDRALQFTVR IFNKNGLERE AKSTTMDKNQ  120
KADTFKNQKR PPKYPYNPKQ THVDVENGTE HETPRKKVAV EKAKVLLTPD IPQFVKCLKS  180
YNVNKSCFIY VPKSFCEQLS ESANKTTVIL SNSEGKKWKV NFVLQKGYHA FCGGWKQFVK  240
DNKLKEGDVC VFQLVNTNEL KVSVFDNPPE YLLKLAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18090.13e-16B3 family protein