PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT07129 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | MYB_related | ||||||||
Protein Properties | Length: 96aa MW: 10951.2 Da PI: 7.6894 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 29.2 | 2.1e-09 | 7 | 53 | 1 | 44 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 r++WT++ +l+ +a +q+ ++ +W +ar +g g++ ++k ++ OIT07129 7 RNSWTPQQNKLFERALAQFDKDtpdRWQNVARAVGGGKSVDEIKRHY 53 789*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 96 aa Download sequence |
MASNSIRNSW TPQQNKLFER ALAQFDKDTP DRWQNVARAV GGGKSVDEIK RHYEILIEDL 60 RRIESGLVPL PTYTNGGNTG VAADEEQRLL RYLNLH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75250.1 | 8e-33 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT07129 |