PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT07127 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | MYB_related | ||||||||
Protein Properties | Length: 81aa MW: 8790.76 Da PI: 8.9667 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 28.5 | 3.7e-09 | 8 | 53 | 2 | 44 |
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 g+WTt + + +a + + ++ +W+ +a+ +g g+t+ ++k ++ OIT07127 8 GSWTTKQNKAFEKALAVYDKDtpdRWSNVAKAVGGGKTAAEVKRHY 53 79*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 81 aa Download sequence |
MSSSQAQGSW TTKQNKAFEK ALAVYDKDTP DRWSNVAKAV GGGKTAAEVK RHYEILVHDI 60 MFIENGGVPF PNYTGGGTTN N |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G39250.1 | 1e-24 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT07127 |