PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT07075

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

DBB

Protein Properties

Length: 212aa MW: 23553.7 Da PI: 6.2985

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT07075	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	23.2	1.4e-07	4	33	5	34
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeH 34 C+ +e+ ++lfC ++ lC+ C ++ H OIT07075 4 LCDVCESAAAILFCAADEAALCRACDEKVH 33 7**************************998 PP
2	zf-B_box	25.7	2.4e-08	52	91	2	37
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg....H 37 + ++C+ +e+ ++ ++Ce +++ lC +C + H g H OIT07075 52 KIQRCDICENAPAFFYCEIDGSSLCLQCDMIVHVGgkrtH 91 6689**************************9995544455 PP

Sequence ? help Back to Top
Protein Sequence Length: 212 aa Download sequence
MRTLCDVCES AAAILFCAAD EAALCRACDE KVHMCNKLAS RHVRVGLADP SKIQRCDICE 60 NAPAFFYCEI DGSSLCLQCD MIVHVGGKRT HGRYLLIRQR IEFPGDKLGP SNELGLPSTE 120 QGDVRREPAH PFKLPMIENH QSNRETAKVG LENNVNSSVK MENELIDLNS RPQRMHGQSS 180 NNQEQGMDMF SGSNHESVGV VPDGPFKREP EK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38960.1	2e-87	DBB family protein

Link Out ? help Back to Top
Ensembl	OIT07075