PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT06926
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family WRKY
Protein Properties Length: 357aa    MW: 40209.6 Da    PI: 10.0006
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT06926genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY101.64.6e-32290348259
               --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                D+y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ edp+++++tYegeHnh+
  OIT06926 290 ADEYSWRKYGQKPIKGSPHPRGYYKCSSMrGCPARKHVERCLEDPSMLIVTYEGEHNHP 348
               69************************9988****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    
MYFGVESGTM EEIEEANKAA IENCHRVISL LSKPHDQNQY GNLLVRETGE AVHKFKKVVT  60
LLNSTLGHAR VRKMNKFKTP LPHNILVENP SCKIDDQHKH LRLLPIDYRE NRVLEIGSNV  120
KCNLTLGSSS LELSSNSRNP LNFGQQTPLP SYNYLQQQQQ QQQRRFLLQQ QQLKQPAEMM  180
YRRSNSGISL NFDSSICTPT MSSTRSFISS LSVDGSIANL DGSSFHLIGA SRSADQSSFQ  240
HKRRCSARGD EGSVKCGSSG RCHCSKKRKH RVKRSIKVPA ISNKLADIPA DEYSWRKYGQ  300
KPIKGSPHPR GYYKCSSMRG CPARKHVERC LEDPSMLIVT YEGEHNHPTL PSQSANA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30590.11e-96WRKY family protein