PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT06904
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family G2-like
Protein Properties Length: 464aa    MW: 50796.4 Da    PI: 4.8468
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT06904genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like108.24.5e-34246300155
   G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
               k+r+rWtpeLHe+Fveav++LGGse+AtPk +l+lmkv+gLt++hvkSHLQkYR+
  OIT06904 246 KQRMRWTPELHEAFVEAVNKLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRT 300
               79****************************************************8 PP
2Myb_DNA-binding56.37.5e-18248299148
                      TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r+rWT+e++e +v+av++lGg    t+k + + m  +g+t +++ks++qky+
         OIT06904 248 RMRWTPELHEAFVEAVNKLGGSeraTPKGVLKLMKvEGLTIYHVKSHLQKYR 299
                      89******************99*****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 464 aa     Download sequence    
MEARPTLSVQ RAGAHQLSNF GASGAHSSLP VLPASLEDKY PMLPRAVLSS LPSNSGAVGH  60
LLSSSSGFST NLHFSSVLPH EEHSAPIPFI SQSTNNEALI PLANSGVLQS AASSQYLNEN  120
NEPWCTAPLP DYLDYSLNTP VHNTQLDCSN TGDCRIPSED LSKQSDWPEW ADLVMNDDDA  180
LTSNWNDIML DTSIADAEPK MQYQEQKQPS NFPVHQGQPL QQIPTASVET SAIVPASSTA  240
SGASSKQRMR WTPELHEAFV EAVNKLGGSE RATPKGVLKL MKVEGLTIYH VKSHLQKYRT  300
ARYKPEASEG SSEKKESSVG DLSALDLKTG IEITEALRLQ MEVQKQLHEQ LEIQRNLQLR  360
IEEQGRYLQE MFEKQCKSIP SIELVKASSS IADASAQSTD AVQRSSNKND PGVPPGNPQE  420
AGDYVTQKVG EKQKEQEREE LENPETNISS SSNTPPTKRA KLDE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28610.18e-95G2-like family protein