PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT06864
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family WRKY
Protein Properties Length: 328aa    MW: 35902 Da    PI: 10.1551
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT06864genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.68.4e-31249306359
               -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
               D+++WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +dp ++++tYegeH+h+
  OIT06864 249 DEFSWRKYGQKPIKGSPYPRGYYKCSSVrGCPARKHVERAMDDPAMLIVTYEGEHRHT 306
               99************************988****************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MAVDFIGFSK MNEQLALQEA ASAGLKSMEH LIRLVSHQQQ QQPVQLDCRE ITDFTVSKFK  60
KVISILDRTG HARFRRGPVQ VHPHNFISFS LSPSNQQLNL APAKETPPPP LSVSPPLTAL  120
TLDFTKPNVD RPAGNSNAIV AVKSKETFCI STPMATSTNS SSFISSITGE GSVSNGKQGS  180
SMFLPPAPAV SAGKPPVAGK RCREHEHSED ISGKSTGSGK CHCKKRKSRV KTVVRIPAIS  240
SRIADIPGDE FSWRKYGQKP IKGSPYPRGY YKCSSVRGCP ARKHVERAMD DPAMLIVTYE  300
GEHRHTIGAM QENNSQMMVF GSTEERKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.21e-98WRKY family protein