PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT06796
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family G2-like
Protein Properties Length: 308aa    MW: 33677.6 Da    PI: 6.8429
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT06796genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like95.34.7e-30140193155
   G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
               +prl+Wtp+LH+rFv++v++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl
  OIT06796 140 RPRLVWTPQLHKRFVDVVAHL-GIKNAVPKTIMQLMNVEGLTRENVASHLQKYRL 193
               59*******************.********************************8 PP
2Myb_DNA-binding48.42.1e-15142192148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r+ WT+++++++vd+v+ lG +   +ktI++ m+ +g+t++++ s++qky+
         OIT06796 142 RLVWTPQLHKRFVDVVAHLGIKnaVPKTIMQLMNvEGLTRENVASHLQKYR 192
                      789*******************9***************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MGEEVKITGG DAFAGDDNRV LEWEDGLPSL DDLTPLSQAL IPPELASAFK ISPEPAKTMT  60
DVNRASENTF SSLRGSGPLQ QLHILSSPET DPTENGSDPR KTRRIDPEML DADSALLRNE  120
NCGGGDDSNN NSASKTLNKR PRLVWTPQLH KRFVDVVAHL GIKNAVPKTI MQLMNVEGLT  180
RENVASHLQK YRLYLKRMQG LSNEGPTSSD HLFASTPVPQ SLQQSGGNGH NSNGHNSNGH  240
NGNGHAQMPM PMPMPMMYPP QMVPMPMMGI SGHGHGHGFH HQYNMGAQQR DWSGNKFGSY  300
HHVAPSEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46640.22e-79G2-like family protein