PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT06597
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 293aa    MW: 33118 Da    PI: 5.8759
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT06597genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.59.5e-2095144255
       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
               +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f tae Aa a+++a+++++g
  OIT06597  95 RYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFETAEAAALAYDEAALRFKG 144
               8********.**********94....45************************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MERGDCSSNE MEEKENNDNI DHPQLQEEPY NIYSSARSQH DMSAMVSVLS QVIGNSTTHS  60
SSANVTPLTL PQSAVALQNQ SQSIHEDQGN SRRKRYRGVR QRPWGKWAAE IRDPKKAARV  120
WLGTFETAEA AALAYDEAAL RFKGNKAKLN FPERVQGKFQ YLTTATSQDH HHLPNNIVAQ  180
QYIPTTSNNN HPLPFQEHYP SLHHYAQLLQ SDSNITDLNF GVSPSYNQQL SDSFDFSQSS  240
SNSTLSELPA LTLQSSYKQE EEVFMRFSSH FGTSSSSCGP HESNWEEFED RQS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61890.17e-42ERF family protein