PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT06597 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 293aa MW: 33118 Da PI: 5.8759 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.5 | 9.5e-20 | 95 | 144 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp+ + +r++lg+f tae Aa a+++a+++++g OIT06597 95 RYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFETAEAAALAYDEAALRFKG 144 8********.**********94....45************************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 293 aa Download sequence |
MERGDCSSNE MEEKENNDNI DHPQLQEEPY NIYSSARSQH DMSAMVSVLS QVIGNSTTHS 60 SSANVTPLTL PQSAVALQNQ SQSIHEDQGN SRRKRYRGVR QRPWGKWAAE IRDPKKAARV 120 WLGTFETAEA AALAYDEAAL RFKGNKAKLN FPERVQGKFQ YLTTATSQDH HHLPNNIVAQ 180 QYIPTTSNNN HPLPFQEHYP SLHHYAQLLQ SDSNITDLNF GVSPSYNQQL SDSFDFSQSS 240 SNSTLSELPA LTLQSSYKQE EEVFMRFSSH FGTSSSSCGP HESNWEEFED RQS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61890.1 | 7e-42 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT06597 |