PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT06544
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family WRKY
Protein Properties Length: 661aa    MW: 73050.8 Da    PI: 6.8225
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT06544genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY102.72e-32214270259
               --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
               dDgy+WrKYGqK+vkgsefprsYY+Ct+++Cpvkkkvers+ d++++ei+Y+g Hnh+
  OIT06544 214 DDGYTWRKYGQKHVKGSEFPRSYYKCTQQNCPVKKKVERST-DGQITEIVYKGAHNHH 270
               8****************************************.***************8 PP
2WRKY104.55.6e-33421479159
               ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
               ldDgy+WrKYGqK+vkg+++prsYY+CtsagCpv+k+ver+ ++ k v++tYeg+Hnhe
  OIT06544 421 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCPVRKHVERAPDNLKSVITTYEGKHNHE 479
               59********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 661 aa     Download sequence    
MERNIGEPID DWNSQIVGNL DSETMLDSQE SDAKVEERSG NAENGSLFPN NNNKRGSIAE  60
RRAAKCGFNA STISIAQFRV TSTSTPEMSP PTARPTFLTI PPGLTPAALL DSPIMLPNSL  120
APQSPTTGSF HFSNINQENT MKTTQIARDH FEFPVESPKA TALKNCSLET NVGQNMSCIG  180
LTNIHESGNC TRRANQYEQR SAVAGNNITP NGSDDGYTWR KYGQKHVKGS EFPRSYYKCT  240
QQNCPVKKKV ERSTDGQITE IVYKGAHNHH KSQPPRRATM SSTAYGLGEM SEGNIGGSNS  300
WTSVQFGRNK DARAPSGLDR TSSASVLTEA SDPLMLNYQK TNMNAFESAT PEPSSTLASR  360
DDEDEDRATE GSTSLGDDVD DYAFDHKRRR REFYSTETSL SLRTAREPRV VVQIESEIDI  420
LDDGYRWRKY GQKVVKGNPN PRSYYKCTSA GCPVRKHVER APDNLKSVIT TYEGKHNHEV  480
PSTNKTNCAI SGNQALTSTS KPHKVSNSGM QVQDCNFQFN KKPFDYVRPS FVDLRFGAAS  540
SIYDLKFPTN LHNPLSYASF LLSPNPLQMP EFPLPMSLPF GPNIVPPLGG FHFNDLPLTP  600
NGVFSIAGED EKYIHDNNNN NNKSSRLVKG NEDIKNENLC DHQDGASSAV FCGQIMDNFP  660
S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26440.14e-85WRKY family protein