PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT06516
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family WRKY
Protein Properties Length: 503aa    MW: 54953.3 Da    PI: 7.042
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT06516genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY79.43.9e-25197253259
               --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
               +DgynWrKYGqK+vk  + +rsYYrCt+++C++kk +e+s++ ++v+ei+Y+++Hnh+
  OIT06516 197 RDGYNWRKYGQKQVKIPQGSRSYYRCTHSECCAKK-IECSDHSNRVMEIIYRSQHNHD 253
               7********************************98.*********************7 PP
2WRKY992.9e-31365422259
               --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
               +Dgy+WrKYGqK+vkg+++pr+YYrCtsagCpv+k++er+ + +++++itY+g H+h+
  OIT06516 365 SDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIERAVDSTSALIITYKGVHDHD 422
               7********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 503 aa     Download sequence    
MDEENESSKA GGAENSNPEE NKNENSSVHD GGVLDDGGDE RTESGIESLQ EPKVKISVSE  60
TLAPATVHSS VQQIESDVQS KFDTDSSSSH QLSEVPVEYA LPPFEPAKEI KDKISVTRPD  120
TLSAQVQTEH QQRMPDEASS LELSPTSVTP SISSVPSPTL AERQLSAAVN GSTGEVAKRS  180
SDGKVLPVVP VLKTPSRDGY NWRKYGQKQV KIPQGSRSYY RCTHSECCAK KIECSDHSNR  240
VMEIIYRSQH NHDPPPRVNC SKESKPIVLP APANDNRMIA CPKRSFNETV PSSLKENLQE  300
TSPIAEKANQ DSCGSDTDTE ITIKEEHSDE KKRLKKSGES SESVSRPGKK PKLVVHAACD  360
VGISSDGYRW RKYGQKMVKG NPHPRNYYRC TSAGCPVRKH IERAVDSTSA LIITYKGVHD  420
HDMPVPKKRQ SPPSAPLIAA AAPASLTNLQ GKKPELLQHQ KSTTQWSVDK EGALTGEKLD  480
LGGEKAMESA RTLLSIGFEI KPC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30935.11e-100WRKY family protein