PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT06486
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 836aa    MW: 94089.3 Da    PI: 10.0587
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT06486genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B338.62e-1228117198
               EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
        B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
               ffk+    + ++ +rl++p +fa+++ ++  ++  + le ++g++Wev++    ++g++ l++GW++F +   +  g f++F ++ rs f  +v++f+
  OIT06486  28 FFKII--LSQHECSRLRIPEDFASRYCKNMLNP--VYLEVPTGEVWEVEV--VHSQGQICLGTGWQDFSDFYSISCGHFLMFGYNARSHF--NVTIFD 117
               66766..66677789***********5454444..***************..999999**************************999999..999987 PP
2B350.82.9e-16283375498
               E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
        B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                + ps+v++  +l++  kfa+++ +++ ++  l++  +   sW+vk+  + ++   +  +GWk Fv +n+Lk gD++vF++++ ++    v++fr
  OIT06486 283 FMQPSYVFSPFNLSVALKFARKYFLENYGNLVLRVPGRGRGSWSVKC--TTRGTNATVYSGWKAFVLDNKLKCGDVCVFEVIKGTRLFIDVTIFR 375
               6889*******************88888887888888888*******..66666777889********************987655556777776 PP
3B343.55.5e-14539630599
               -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS
        B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99 
               + ps+v+k   l ++  fa ++ ++k ++  l+l+ +   sW vk+   k+++++ ++  Wk Fv +n+L+ gD++vF+l++  ++  l+v++fr+
  OIT06486 539 MQPSYVSKPYSLQISLLFAVKYFQEK-CG-NLVLRVPGRGSWPVKYALGKSKSKICFS--WKAFVLDNKLNFGDVCVFELIKGgTKPILNVTIFRA 630
               679999**999***********6553.44.8***************999999999999..********************9766888889999885 PP
4B354.12.7e-17740827694
               ..-HHHHT...T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
        B3   6 tpsdvlks...grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                ps+v++     +l++  + a+++   k++  +++l+++s rsW vk+  + +     lt+GWkeFv +n+Lk+gD++vF++++rs+  ++v
  OIT06486 740 QPSYVSSAigpMQLSITLPIARKFFATKHS--DVILQNSSKRSWAVKC--SLGTVNAKLTSGWKEFVLDNNLKVGDVCVFERVSRSKLLFNV 827
               344444446667899999999999766444..8***************..55555677***********************88776664444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 836 aa     Download sequence    
MSAKPQLQSG ERSSIWKSSS AKIPQPKFFK IILSQHECSR LRIPEDFASR YCKNMLNPVY  60
LEVPTGEVWE VEVVHSQGQI CLGTGWQDFS DFYSISCGHF LMFGYNARSH FNVTIFDLSA  120
SEIEYPYSSA HGIHIAISYS HETRHAPERD QSVSDDSVEI IEGIPRSQKA NAIIPDMVEN  180
SVENLDHCPL GQSSKRQRQE GDAEDDVSVD MHIKKMKVEK LQEDVASPSF IRKDQKRNKG  240
CRMHKQQSKS VYGQNKAVMD KKSTVAYQRA KAFKSKNPFI ISFMQPSYVF SPFNLSVALK  300
FARKYFLENY GNLVLRVPGR GRGSWSVKCT TRGTNATVYS GWKAFVLDNK LKCGDVCVFE  360
VIKGTRLFID VTIFRTAWST LMHKIVGEVP GGSDSKSNVI KTDNCVPCSQ PIVVHTKKLK  420
QRTGEEHGEG TEIEHSVEIL GHCPLVHGSK RKRPEGEAEG DVSIDLHTKS INVENTQKHV  480
TSPSITRKTK RSGESCRMQK QQSKVVYAKN KTVLDKEMSI AYQRAKAFKS ENPFVIYFMQ  540
PSYVSKPYSL QISLLFAVKY FQEKCGNLVL RVPGRGSWPV KYALGKSKSK ICFSWKAFVL  600
DNKLNFGDVC VFELIKGGTK PILNVTIFRA AESKPMHKIY AKFAGVSDRK NKTIKTEKSV  660
PCSQPKIFHS KKLNLEKKQK GDSDGFTSKI KEEFSVFTGK HVQQSKSSCK GSAVAKEMVL  720
AYQRAKAFTS ENPFFICFMQ PSYVSSAIGP MQLSITLPIA RKFFATKHSD VILQNSSKRS  780
WAVKCSLGTV NAKLTSGWKE FVLDNNLKVG DVCVFERVSR SKLLFNVIIF TSAEGM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.17e-36B3 family protein