PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT06485
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 1081aa    MW: 122239 Da    PI: 9.6585
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT06485genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3376.2e-1227116198
               EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
        B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
               ffk+    + ++++rl++p +fa+++ ++  ++  + le ++g++Wev++    ++g++ l+ GW++F +   +  g f++F ++ rs f  +v++f+
  OIT06485  27 FFKII--LSQHERSRLRIPEDFASRYCKNMLNP--VYLEVPTGEVWEVEV--VHSQGQICLGIGWQDFSDFYSISCGHFLMFGYNARSHF--NVTIFD 116
               67777..78889999***********5454444..***************..999999**************************999999..999987 PP
2B340.64.4e-13280360490
               E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
        B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                + ps+v++  +l+++ kfa+++ +++ +   l+l+ +   sW+vk+++  +  +++    Wk Fv +n+Lk gD++vF++++  + 
  OIT06485 280 FMQPSYVFSPFNLSMSLKFARKYFLENYR--NLVLRVPGRGSWSVKCTFGTTNAKIF----WKAFVMDNKLKPGDVCVFEVIKGAKL 360
               6889*******************887545..7***************8866655554....*******************8764433 PP
3B3469.6e-15531620497
               E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
        B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                + ps+v+k  +l ++ +fa+++  ++ +    +l+ +   sW+v++ + ++s++  +++GWk Fv +n+Lk gD++vF++++ ++  + v++f
  OIT06485 531 FMQPSYVSKPYNLNISATFARKYFRDEYS--NFVLRVPGRGSWSVEC-FLGTSNA-QIRSGWKAFVLDNKLKYGDVCVFEVIKVTKLLMDVTIF 620
               6789*******************777555..69**************.5666655.489*********************99877776666666 PP
4B335.51.8e-11786875699
               ..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
        B3   6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                ps+v+   rl ++  fa+++  +k ++  l+l+ +   sW++k+   k++ ++ +   Wk Fv +n+Lk gD++vF+l++ ++  l v++fr+
  OIT06485 786 QPSYVSIPYRLDISFLFARKYLWEK-CG-FLVLRVPGRGSWSIKYVLGKSKTKICFY--WKAFVLDNKLKFGDVCVFELIKGTKPILDVTIFRT 875
               5778888888999999999994333.44.6999************999999999999..*********************88777788888885 PP
5B353.73.9e-179851072694
                ..-HHHHT...T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
        B3    6 tpsdvlks...grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94  
                 ps+v++     +l++  + a+++   k++  +++l+++s rsW vk+  + +     lt+GWkeFv +n+Lk+gD++vF++++rs+  ++v
  OIT06485  985 QPSYVSSAigpMQLSITLPIARKFFATKHS--DVILQNSSKRSWAVKC--SLGTVNAKLTSGWKEFVLDNNLKVGDVCVFERVSRSKLLFNV 1072
                344444446667899999999999766444..8***************..55555677***********************88776664444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 1081 aa     Download sequence    
MAAKPQLQNG EGSSHWKSST NITQPKFFKI ILSQHERSRL RIPEDFASRY CKNMLNPVYL  60
EVPTGEVWEV EVVHSQGQIC LGIGWQDFSD FYSISCGHFL MFGYNARSHF NVTIFDLSAS  120
EIEYPYSSAH GIHTPISYSH ETRHAPERDQ SESDDSVEIL EGIPRSQKAN PIVPYMVENS  180
VENLDHCPLG QSSKRQKQEG DTEDDVFVDM HIKRMKVEKL QEDVASFTRE GQKSCEGCCT  240
HMQQSKNVYD ENKTVMDKER AIAYQRAKGF KSKNPFIISF MQPSYVFSPF NLSMSLKFAR  300
KYFLENYRNL VLRVPGRGSW SVKCTFGTTN AKIFWKAFVM DNKLKPGDVC VFEVIKGAKL  360
LMDITIFPAA GSTPMHKIAG EVPGVSDKSV PFSQSRIVQT KNLKQRRGGA CGFNSKVKAE  420
HGEGTGIEHP FEILGHCLLG QYRKRKRLER DAEDDVPFDT HTKNIKVETS QEDVALPSFR  480
KTKKSGESCR MHTQQTTIVC GKNKAVMDKE QAMAYQRAKA FKSKNPFIIS FMQPSYVSKP  540
YNLNISATFA RKYFRDEYSN FVLRVPGRGS WSVECFLGTS NAQIRSGWKA FVLDNKLKYG  600
DVCVFEVIKV TKLLMDVTIF PAAGSTPMLK IAGEVTGVSD SKRKIIKTDI YVPCSSPKVV  660
HTNRLKQRRG EEHDEGTGIE SSVEILGHCP LGHDSKIKRL EEETEDDVSI DIHAKSIKVA  720
NTQEDVASPS FTGKTKKSGE SCRMDKQQSK RVYDKNTTVL DKERSVAYQR AKDFKSENPY  780
VMYFMQPSYV SIPYRLDISF LFARKYLWEK CGFLVLRVPG RGSWSIKYVL GKSKTKICFY  840
WKAFVLDNKL KFGDVCVFEL IKGTKPILDV TIFRTAENKP VHKIDGKLPG VSDCKNKTIK  900
TENSVPCSQS KIVRSRKLNL EKQQKGNLDG FTSKTKEELS EDAGKHVQQS KSSCKGSAVA  960
KEMVLAYQRA KAFTSENPFF ICFMQPSYVS SAIGPMQLSI TLPIARKFFA TKHSDVILQN  1020
SSKRSWAVKC SLGTVNAKLT SGWKEFVLDN NLKVGDVCVF ERVSRSKLLF NVIIFTSAEG  1080
M
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.16e-32B3 family protein