PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT06370

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

HSF

Protein Properties

Length: 354aa MW: 40336.6 Da PI: 7.7935

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT06370	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	114.9	5.1e-36	25	117	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+y++++d+++++++sw e+ ++f+v+ + efa+++Lp+yFkh+nf+SFvRQLn+YgF+k+ ++ weF+++ Fk+g+k+ll++i+ OIT06370 25 FLTKTYQLVDDPNTDHIVSWGEDDSTFIVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDR---------WEFANEFFKRGEKHLLCEIH 112 9***************************************************************99.........**************** PP XXXXX CS HSF_DNA-bind 99 rkkse 103 r+k++ OIT06370 113 RRKTA 117 986 PP

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence
MALMLDNCEG ILLSLDSHKS VPAPFLTKTY QLVDDPNTDH IVSWGEDDST FIVWRPPEFA 60 RDLLPNYFKH NNFSSFVRQL NTYGFRKIVP DRWEFANEFF KRGEKHLLCE IHRRKTAQPQ 120 ISMNHHHHSL NHQMNMSGPN FFPNYPNNNR LSISPPDSDE LLLQQQQPNI NWCDSPTTIT 180 SSNNNNTTVT ALSEDNERLR RSNNMLMSEL AHMRKLYNDI IYFVQNHVKP VAPSSSYNPS 240 SLLPASATPI VQKHMINPRQ GMINNGMNIM MSNFNNVNSP SKTSQSSSVT ILEEAAADMG 300 INRSTKLFGV PLMSKKRVHP EYSSSSFNMV ETNKARLVLE KDDLGLNLMP PSSS

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence

MALMLDNCEG ILLSLDSHKS VPAPFLTKTY QLVDDPNTDH IVSWGEDDST FIVWRPPEFA  60
RDLLPNYFKH NNFSSFVRQL NTYGFRKIVP DRWEFANEFF KRGEKHLLCE IHRRKTAQPQ  120
ISMNHHHHSL NHQMNMSGPN FFPNYPNNNR LSISPPDSDE LLLQQQQPNI NWCDSPTTIT  180
SSNNNNTTVT ALSEDNERLR RSNNMLMSEL AHMRKLYNDI IYFVQNHVKP VAPSSSYNPS  240
SLLPASATPI VQKHMINPRQ GMINNGMNIM MSNFNNVNSP SKTSQSSSVT ILEEAAADMG  300
INRSTKLFGV PLMSKKRVHP EYSSSSFNMV ETNKARLVLE KDDLGLNLMP PSSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46264.1	6e-98	HSF family protein

Link Out ? help Back to Top
Ensembl	OIT06370