PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT06155 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | NF-YA | ||||||||
Protein Properties | Length: 209aa MW: 23135.7 Da PI: 7.8375 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 104.6 | 8.9e-33 | 115 | 171 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 dep++VNaKQy++Il+RRq+Rak+e+ekkl k+rkpylheSRh hAl+R+Rg+gGrF OIT06155 115 DEPVFVNAKQYHGILRRRQSRAKAESEKKL-LKARKPYLHESRHLHALKRARGCGGRF 171 79****************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 209 aa Download sequence |
MTSSLHYHSD GSENEQPEKQ SEAHSESSSP ATGMSLPGTV TSNMHYVMPA QLGNENAMLQ 60 AQTAYPYPDP YYRSIFAPYD AQPYPTQPYP AQPMVHVQLM GIQQAGVPLP SDAIDEPVFV 120 NAKQYHGILR RRQSRAKAES EKKLLKARKP YLHESRHLHA LKRARGCGGR FTAKKTDNQP 180 KQDESGDNSQ VNINLESGKN EVASAENAS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30500.2 | 2e-50 | NF-YA family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT06155 |