PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT06147

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

Dof

Protein Properties

Length: 462aa MW: 50773.3 Da PI: 5.6347

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT06147	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.8	2.7e-39	109	168	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++k+l+cprC+s++tkfCy+nny++sqPr+fCk+C+ryWt+GG++rnvPvG+grrknk+s OIT06147 109 PDKILPCPRCNSMETKFCYFNNYNVSQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNS 168 68999****************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 462 aa Download sequence
MWELKDPAIK LFGKTIQLPD IQDDSSPEET NEEEEVQTHK DDFGGNLDDD KDEMGTLTGK 60 ELQDQNSDPS RSDTIEGPPV DNDCSTRPSK SEEEQGEASN SQEKIIKRPD KILPCPRCNS 120 METKFCYFNN YNVSQPRHFC KNCQRYWTAG GTMRNVPVGA GRRKNKNSIS HYRQISVPET 180 LPNAQTGYPN GIQQPILAFG SHKPLCESMA SVLNIADKTM HNRPPNGFHK PEQSGVQVSY 240 GAGDNGDDHS RRSSVSAANS EDEVNKIGPD LLRKNCPSFP PYLACYPRAA WPYPCSSVHW 300 TSAVPPPGYC PPVFPMPFYP TAAYWGYNVA GSWNVPLVSP PTASLTQTPP TSGPSSPLGK 360 HSRDENILKP LNSKEEPPKE SNHEKCLWVP KTLRIDDPGE AAKSSIWATL GIKHDSVDSV 420 GGSPFSAFQS KNDGNNSVLE TSTVLQANPA ALSRSLNFNE GL

Sequence ? help Back to Top

Protein Sequence Length: 462 aa Download sequence

MWELKDPAIK LFGKTIQLPD IQDDSSPEET NEEEEVQTHK DDFGGNLDDD KDEMGTLTGK  60
ELQDQNSDPS RSDTIEGPPV DNDCSTRPSK SEEEQGEASN SQEKIIKRPD KILPCPRCNS  120
METKFCYFNN YNVSQPRHFC KNCQRYWTAG GTMRNVPVGA GRRKNKNSIS HYRQISVPET  180
LPNAQTGYPN GIQQPILAFG SHKPLCESMA SVLNIADKTM HNRPPNGFHK PEQSGVQVSY  240
GAGDNGDDHS RRSSVSAANS EDEVNKIGPD LLRKNCPSFP PYLACYPRAA WPYPCSSVHW  300
TSAVPPPGYC PPVFPMPFYP TAAYWGYNVA GSWNVPLVSP PTASLTQTPP TSGPSSPLGK  360
HSRDENILKP LNSKEEPPKE SNHEKCLWVP KTLRIDDPGE AAKSSIWATL GIKHDSVDSV  420
GGSPFSAFQS KNDGNNSVLE TSTVLQANPA ALSRSLNFNE GL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	5e-85	Dof family protein

Link Out ? help Back to Top
Ensembl	OIT06147