PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT06016 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | WOX | ||||||||
Protein Properties | Length: 376aa MW: 41838.4 Da PI: 7.5013 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 54.7 | 1.7e-17 | 48 | 108 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++ +eq+++Le+ F++ +p ++e++++ +kl ++ +++V++WFqNr+ + k+ OIT06016 48 KPRWNPRPEQIRILEAIFNSgMVNPPRDEIRKIRAKLqeygQVGDANVFYWFQNRKSRSKH 108 89*****************99*************************************995 PP | |||||||
2 | Wus_type_Homeobox | 111.8 | 3.7e-36 | 47 | 110 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +++RW+P+peQi+iLe++++sG+++P+++ei++i+a+L+eyG+++d+NVfyWFQNrk+R+++kq OIT06016 47 PKPRWNPRPEQIRILEAIFNSGMVNPPRDEIRKIRAKLQEYGQVGDANVFYWFQNRKSRSKHKQ 110 689***********************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 376 aa Download sequence |
MASSNRHWPS MFKSKPCNQW QHDINSSLIQ RAPCNPGGGC EERSPEPKPR WNPRPEQIRI 60 LEAIFNSGMV NPPRDEIRKI RAKLQEYGQV GDANVFYWFQ NRKSRSKHKQ RHLQNKAQQN 120 HNNITNSHVA ITAPTSSSSS SEKSSPNSTG HHKSSLTFSI GSANVMDLLN SPTASVNQQQ 180 QQNYNFQSAN NEFLSTEPFF FTVQPPTPTH SPAAITQGFC IPDSTGFSHA SDSSGHLFLS 240 EWMGISQTPS KKDEDEKINL QSQLNYAVTS APTNTHSTVF PLTSSTIPTI SHIQGLVEPA 300 DAGPTRSTVF INDVAFEVGL GAFNVREVFG DDAVLVHSSG EPLITNEWGL TLQPLQHGAF 360 YYLLHLEDRL MWKRNG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33880.1 | 1e-59 | WOX family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT06016 |