PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT06016
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family WOX
Protein Properties Length: 376aa    MW: 41838.4 Da    PI: 7.5013
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT06016genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox54.71.7e-1748108257
               T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
  Homeobox   2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
               ++R+++ +eq+++Le+ F++   +p ++e++++ +kl    ++ +++V++WFqNr+ + k+
  OIT06016  48 KPRWNPRPEQIRILEAIFNSgMVNPPRDEIRKIRAKLqeygQVGDANVFYWFQNRKSRSKH 108
               89*****************99*************************************995 PP

2Wus_type_Homeobox111.83.7e-3647110265
  Wus_type_Homeobox   2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                        +++RW+P+peQi+iLe++++sG+++P+++ei++i+a+L+eyG+++d+NVfyWFQNrk+R+++kq
           OIT06016  47 PKPRWNPRPEQIRILEAIFNSGMVNPPRDEIRKIRAKLQEYGQVGDANVFYWFQNRKSRSKHKQ 110
                        689***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 376 aa     Download sequence    
MASSNRHWPS MFKSKPCNQW QHDINSSLIQ RAPCNPGGGC EERSPEPKPR WNPRPEQIRI  60
LEAIFNSGMV NPPRDEIRKI RAKLQEYGQV GDANVFYWFQ NRKSRSKHKQ RHLQNKAQQN  120
HNNITNSHVA ITAPTSSSSS SEKSSPNSTG HHKSSLTFSI GSANVMDLLN SPTASVNQQQ  180
QQNYNFQSAN NEFLSTEPFF FTVQPPTPTH SPAAITQGFC IPDSTGFSHA SDSSGHLFLS  240
EWMGISQTPS KKDEDEKINL QSQLNYAVTS APTNTHSTVF PLTSSTIPTI SHIQGLVEPA  300
DAGPTRSTVF INDVAFEVGL GAFNVREVFG DDAVLVHSSG EPLITNEWGL TLQPLQHGAF  360
YYLLHLEDRL MWKRNG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33880.11e-59WOX family protein